Transcript: PKIA-AS1:2

Basic information

LNCipedia transcript ID: PKIA-AS1:2 
HGNC Gene Symbol: PKIA-AS1    
HGNC Full Gene Name: PKIA antisense RNA 1
Ensembl Gene ID: ENSG00000254266
Ensembl Transcript ID: ENST00000519242
Location (hg19): chr8:79447261-79470732
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 995 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000519242; ENST00000519242.1; RP11-594N15.2-002; OTTHUMT00000379419.1; NONHSAT127366
Alternative gene names: ENSG00000254266; RP11-594N15.2; ENSG00000254266.1; OTTHUMG00000164617.1; ENSG00000254266.5; PKIA-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -24.6948 non-coding 
CPAT coding probability 6.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PKIA-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-IL7-1:2
3.1 lnc-IL7-1:2
4.0 PKIA-AS1:2
4.1 PKIA-AS1:2
5.0 PKIA-AS1:2
5.1 PKIA-AS1:2
5.2 PKIA-AS1:2