Transcript: PLCE1-AS1:2

Basic information

LNCipedia transcript ID: PLCE1-AS1:2 
LNCipedia gene ID: PLCE1-AS1
Location (hg19): chr10:96042918-96046828
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 557 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000440198.1; RP11-76P2.3-001; OTTHUMT00000049465.1; NONHSAT015720
Alternative gene names: ENSG00000229130.2; RP11-76P2.3; OTTHUMG00000018787.1; ENSG00000268894.2; PLCE1-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -67.6776 non-coding 
CPAT coding probability 6.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PLCE1-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NOC3L-1:1
4.0 PLCE1-AS1:2
4.1 PLCE1-AS1:2
5.0 PLCE1-AS1:2
5.1 PLCE1-AS1:2
5.2 PLCE1-AS1:2