Transcript: PLCE1-AS1:4

Basic information

LNCipedia transcript ID: PLCE1-AS1:4 
LNCipedia gene ID: PLCE1-AS1
RefSeq ID: NR_033969
Location (hg19): chr10:96039047-96046827
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1408 bp
Exons: 4
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT015719; NR_033969; NR_033969.1
Alternative gene names: ; PLCE1-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -67.6776 non-coding 
CPAT coding probability 11.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PLCE1-AS1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NOC3L-1:3
4.0 PLCE1-AS1:4
4.1 PLCE1-AS1:4
5.0 PLCE1-AS1:4
5.1 PLCE1-AS1:4
5.2 PLCE1-AS1:4