Transcript: PLS3-AS1:2

Basic information

LNCipedia transcript ID: PLS3-AS1:2 
LNCipedia gene ID: PLS3-AS1
RefSeq ID: NR_110383
Location (hg19): chrX:114752497-114797058
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2068 bp
Exons: 5
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110383; NR_110383.1
Alternative gene names: ; PLS3-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 0.8309 non-coding 
CPAT coding probability 1.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PLS3-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP1-241P17.4.1-4:3
4.0 PLS3-AS1:2
4.1 PLS3-AS1:2
5.0 PLS3-AS1:2
5.1 PLS3-AS1:2
5.2 PLS3-AS1:2