Transcript: PLS3-AS1:6

Basic information

LNCipedia transcript ID: PLS3-AS1:6 
LNCipedia gene ID: PLS3-AS1
Location (hg19): chrX:114682038-114797030
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 8251 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000271826.1|ENCT00000480534.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 9.272 non-coding 
CPAT coding probability 1.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PLS3-AS1:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 PLS3-AS1:6
5.0 PLS3-AS1:6
5.1 PLS3-AS1:6
5.2 PLS3-AS1:6