Transcript: PLUT:5

Basic information

LNCipedia transcript ID: PLUT:5 
HGNC Gene Symbol: PLUT    
HGNC Full Gene Name: PDX1 associated lncRNA, upregulator of transcription
Ensembl Gene ID: ENSG00000247381
Ensembl Transcript ID: ENST00000499662
Location (hg19): chr13:28393513-28491435
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2518 bp
Exons: 5
Sources: Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000499662.3
Alternative gene names: ENSG00000247381.3; PLUT


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -1.6344 non-coding 
CPAT coding probability 5.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PLUT:5 no no no no

Available literature

  1. Akerman (2017), Human Pancreatic β Cell lncRNAs Control Cell-Specific Regulatory Networks., Cell Metab.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 PLUT:5
5.1 PLUT:5
5.2 PLUT:5