Transcript: POT1-AS1:17

Basic information

LNCipedia transcript ID: POT1-AS1:17 
LNCipedia gene ID: POT1-AS1
Location (hg19): chr7:124569952-124766589
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1119 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000224897.2|FTMT22700045944.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 7.0676 non-coding 
CPAT coding probability 1.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
POT1-AS1:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 POT1-AS1:17
5.0 POT1-AS1:17
5.1 POT1-AS1:17
5.2 POT1-AS1:17