Transcript: POU6F2-AS1:2

Basic information

LNCipedia transcript ID: POU6F2-AS1:2 
HGNC Gene Symbol: POU6F2-AS1    
HGNC Full Gene Name: POU6F2 antisense RNA 1
Ensembl Gene ID: ENSG00000224122
Ensembl Transcript ID: ENST00000433519
RefSeq ID: NR_046711
Location (hg19): chr7:39444197-39445945
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 381 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000433519.1; POU6F2-AS1-001; OTTHUMT00000339291.1; NONHSAT120201; NR_046711.1
Alternative gene names: ENSG00000224122.1; POU6F2-AS1; OTTHUMG00000155277.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -143.8352 non-coding 
CPAT coding probability 4.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
POU6F2-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-VPS41-2:1
4.0 POU6F2-AS1:2
4.1 POU6F2-AS1:2
5.0 POU6F2-AS1:2
5.1 POU6F2-AS1:2
5.2 POU6F2-AS1:2