Transcript: PPFIA2-AS1:15

Basic information

LNCipedia transcript ID: PPFIA2-AS1:15 
LNCipedia gene ID: PPFIA2-AS1
Location (hg19): chr12:81664387-81673078
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 350 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT029692
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -333.3557 non-coding 
CPAT coding probability 1.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PPFIA2-AS1:15 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ACSS3-1:11
4.0 lnc-ACSS3-1:11
4.1 lnc-ACSS3-1:11
5.0 lnc-ACSS3-1:11
5.1 PPFIA2-AS1:2
5.2 PPFIA2-AS1:15