Transcript: PROX1-AS1:18

Basic information

LNCipedia transcript ID: PROX1-AS1:18 
LNCipedia gene ID: PROX1-AS1
Location (hg19): chr1:214068050-214159775
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 905 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT009442
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -46.2175 non-coding 
CPAT coding probability 12.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PROX1-AS1:18 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PTPN14-3:11
4.0 PROX1-AS1:18
4.1 PROX1-AS1:18
5.0 PROX1-AS1:18
5.1 PROX1-AS1:18
5.2 PROX1-AS1:18