Transcript: PROX1-AS1:4

Basic information

LNCipedia transcript ID: PROX1-AS1:4 
HGNC Gene Symbol: PROX1-AS1    
HGNC Full Gene Name: PROX1 antisense RNA 1
Ensembl Gene ID: ENSG00000230461
Ensembl Transcript ID: ENST00000626034
Location (hg19): chr1:214005934-214161753
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 310 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000626034.2
Alternative gene names: ENSG00000230461.8; PROX1-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -79.9891 non-coding 
CPAT coding probability 0.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PROX1-AS1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 PROX1-AS1:4
4.1 PROX1-AS1:4
5.0 PROX1-AS1:4
5.1 PROX1-AS1:4
5.2 PROX1-AS1:4