Transcript: PROX1-AS1:52

Basic information

LNCipedia transcript ID: PROX1-AS1:52 
LNCipedia gene ID: PROX1-AS1
Location (hg19): chr1:214005884-214015486
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 319 bp
Exons: 4
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000608936.1
Alternative gene names: ENSG00000230461.4; PROX1-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -93.4635 non-coding 
CPAT coding probability 0.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PROX1-AS1:52 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PTPN14-3:23
4.0 PROX1-AS1:52
4.1 PROX1-AS1:52
5.0 PROX1-AS1:52
5.1 PROX1-AS1:52
5.2 PROX1-AS1:52