Transcript: PROX1-AS1:65

Basic information

LNCipedia transcript ID: PROX1-AS1:65 
LNCipedia gene ID: PROX1-AS1
Location (hg19): chr1:214157156-214161812
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1912 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000230461.4|HBMT00000085991.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 17.3542 non-coding 
CPAT coding probability 22.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PROX1-AS1:65 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 PROX1-AS1:65
5.0 PROX1-AS1:65
5.1 PROX1-AS1:65
5.2 PROX1-AS1:65