Transcript: PROX1-AS1:9

Basic information

LNCipedia transcript ID: PROX1-AS1:9 
LNCipedia gene ID: PROX1-AS1
Location (hg19): chr1:214111542-214161047
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 372 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT009446
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -79.9891 non-coding 
CPAT coding probability 2.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PROX1-AS1:9 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PTPN14-3:7
4.0 PROX1-AS1:9
4.1 PROX1-AS1:9
5.0 PROX1-AS1:9
5.1 PROX1-AS1:9
5.2 PROX1-AS1:9