Transcript: PTCHD1-AS:4

Basic information

LNCipedia transcript ID: PTCHD1-AS:4 
LNCipedia gene ID: PTCHD1-AS
Location (hg19): chrX:23350694-23351522
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 829 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000233067.2|FTMT29000001310.1
Alternative gene names: PTCHD1AS1; PTCHD1AS2; DDX53-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -54.9307 non-coding 
CPAT coding probability 3.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PTCHD1-AS:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 PTCHD1-AS:4
5.0 PTCHD1-AS:4
5.1 PTCHD1-AS:4
5.2 PTCHD1-AS:4