Transcript: PTCHD1-AS:9

Basic information

LNCipedia transcript ID: PTCHD1-AS:9 
LNCipedia gene ID: PTCHD1-AS
RefSeq ID: NR_073010
Location (hg19): chrX:22211122-23311263
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3772 bp
Exons: 12
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_073010.2
Alternative gene names: PTCHD1-AS


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 47.094 non-coding 
CPAT coding probability 0.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
PTCHD1-AS:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 PTCHD1-AS:9
5.1 PTCHD1-AS:9
5.2 PTCHD1-AS:9