Transcript: PTOV1-AS1:1

Basic information

LNCipedia transcript ID: PTOV1-AS1:1 
LNCipedia gene ID: PTOV1-AS1
Location (hg19): chr19:50341907-50354933
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2144 bp
Exons: 4
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000502053
Alternative gene names: ENSG00000245041;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 142.2587 coding 
CPAT coding probability 2.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
PTOV1-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PNKP-1:1
3.1 lnc-PNKP-1:1
4.0 PTOV1-AS1:1
4.1 PTOV1-AS1:1
5.0 PTOV1-AS1:1
5.1 PTOV1-AS1:1
5.2 PTOV1-AS1:1