Transcript: PTOV1-AS1:5

Basic information

LNCipedia transcript ID: PTOV1-AS1:5 
LNCipedia gene ID: PTOV1-AS1
Location (hg19): chr19:50352296-50354313
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2018 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA711:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -42.7699 non-coding 
CPAT coding probability 2.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PTOV1-AS1:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 PTOV1-AS1:5
4.1 PTOV1-AS1:5
5.0 PTOV1-AS1:5
5.1 PTOV1-AS1:5
5.2 PTOV1-AS1:5