Transcript: PTOV1-AS1:6

Basic information

LNCipedia transcript ID: PTOV1-AS1:6 
LNCipedia gene ID: PTOV1-AS1
Location (hg19): chr19:50348025-50353991
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 5967 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT067254
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.3517 non-coding 
CPAT coding probability 1.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PTOV1-AS1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PNKP-1:5
4.0 PTOV1-AS1:6
4.1 PTOV1-AS1:6
5.0 PTOV1-AS1:6
5.1 PTOV1-AS1:6
5.2 PTOV1-AS1:6