Transcript: PTPRG-AS1:7
Basic information
LNCipedia transcript ID: PTPRG-AS1:7
HGNC Gene Symbol: PTPRG-AS1
HGNC Full Gene Name:
PTPRG antisense RNA 1
Ensembl Gene ID:
ENSG00000241472
Ensembl Transcript ID:
ENST00000479018
Location (hg19): chr3:62249604-62304610
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 560 bp
Exons: 5
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000479018; ENST00000479018.1; RP11-204J18.3-009; OTTHUMT00000351671.1; ENST00000479018.5
Alternative gene names: ENSG00000241472; RP11-204J18.3; ENSG00000241472.1; OTTHUMG00000158657.1; ENSG00000241472.2; PTPRG-AS1; ENSG00000241472.6;
RNA sequence:
Structure:
Protein coding potential
In stringent set: yes
Locus conservation
Available literature
- Iranpour (2016), Expression analysis of four long noncoding RNAs in breast cancer., Tumour Biol.
- Zhao (2014), Comprehensive characterization of cancer subtype associated long non-coding RNAs and their clinical implications., Sci Rep
LNCipedia transcript ID history
LNCipedia version | LNCipedia transcript ID |
---|---|
1.3 | lnc-FEZF2-1:4 |
3.1 | lnc-FEZF2-1:4 |
4.0 | PTPRG-AS1:7 |
4.1 | PTPRG-AS1:7 |
5.0 | PTPRG-AS1:7 |
5.1 | PTPRG-AS1:7 |
5.2 | PTPRG-AS1:7 |