Transcript: PWRN1:32

Basic information

LNCipedia transcript ID: PWRN1:32 
LNCipedia gene ID: PWRN1
RefSeq ID: NR_026646
Location (hg19): chr15:24803304-24832927
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1439 bp
Exons: 9
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_026646.1
Alternative gene names: PWRN1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 4.893 non-coding 
CPAT coding probability 11.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PWRN1:32 no no no no

Available literature

  1. Zhang (2015), Cancer Specific Long Noncoding RNAs Show Differential Expression Patterns and Competing Endogenous RNA Potential in Hepatocellular Carcinoma., PLoS ONE
  2. Buiting (2007), C15orf2 and a novel noncoding transcript from the Prader-Willi/Angelman syndrome region show monoallelic expression in fetal brain., Genomics


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 PWRN1:32
5.1 PWRN1:32
5.2 PWRN1:32