Transcript: RAB11B-AS1:6

Basic information

LNCipedia transcript ID: RAB11B-AS1:6 
LNCipedia gene ID: RAB11B-AS1
Location (hg19): chr19:8426439-8455547
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 16168 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000269386.1|HBMT00000727478.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 84.4038 coding 
CPAT coding probability 5.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
RAB11B-AS1:6 no no no no

Available literature

  1. Chen (2018), Long non-coding RNA <i>RAB11B-AS1</i> prevents osteosarcoma development and progression via its natural antisense transcript <i>RAB11B</i>., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 RAB11B-AS1:6
5.0 RAB11B-AS1:6
5.1 RAB11B-AS1:6
5.2 RAB11B-AS1:6