Transcript: RAB30-AS1:3

Basic information

LNCipedia transcript ID: RAB30-AS1:3 
LNCipedia gene ID: RAB30-AS1
RefSeq ID: NR_038903
Location (hg19): chr11:82783108-82784754
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 673 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_038903; NR_038903.1
Alternative gene names: ; RAB30-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 2 non-coding 
PhyloCSF score -130.662 non-coding 
CPAT coding probability 1.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
RAB30-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PCF11-1:18
4.0 RAB30-AS1:3
4.1 RAB30-AS1:3
5.0 RAB30-AS1:3
5.1 RAB30-AS1:3
5.2 RAB30-AS1:3