Transcript: RALY-AS1:1

Basic information

LNCipedia transcript ID: RALY-AS1:1 
LNCipedia gene ID: RALY-AS1
RefSeq ID: NR_109885
Location (hg19): chr20:32580294-32582173
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 672 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_109885; NR_109885.1
Alternative gene names: ; RALY-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -97.7273 non-coding 
CPAT coding probability 2.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RALY-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-EIF2S2-2:3
4.0 RALY-AS1:1
4.1 RALY-AS1:1
5.0 RALY-AS1:1
5.1 RALY-AS1:1
5.2 RALY-AS1:1