Transcript: RALY-AS1:12

Basic information

LNCipedia transcript ID: RALY-AS1:12 
LNCipedia gene ID: RALY-AS1
Location (hg19): chr20:32580317-32582234
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 619 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000228265.1|ENST00000419662.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -80.7769 non-coding 
CPAT coding probability 4.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RALY-AS1:12 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 RALY-AS1:12
5.0 RALY-AS1:12
5.1 RALY-AS1:12
5.2 RALY-AS1:12