Transcript: RAMP2-AS1:16

Basic information

LNCipedia transcript ID: RAMP2-AS1:16 
LNCipedia gene ID: RAMP2-AS1
Location (hg19): chr17:40905949-40913107
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2089 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000197291.4|ENST00000587694.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -4.6603 non-coding 
CPAT coding probability 5.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RAMP2-AS1:16 no no no no

Available literature

  1. Liu (2016), The Potential Roles of Long Noncoding RNAs (lncRNA) in Glioblastoma Development., Mol. Cancer Ther.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 RAMP2-AS1:16
5.0 RAMP2-AS1:16
5.1 RAMP2-AS1:16
5.2 RAMP2-AS1:16