Transcript: RAMP2-AS1:2

Basic information

LNCipedia transcript ID: RAMP2-AS1:2 
LNCipedia gene ID: RAMP2-AS1
Location (hg19): chr17:40905947-40913275
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1681 bp
Exons: 6
Sources: NONCODE v4; Refseq - Dec 2014
Alternative transcript names: NONHSAT053761; NR_024462
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -18.7771 non-coding 
CPAT coding probability 3.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RAMP2-AS1:2 no no no no

Available literature

  1. Liu (2016), The Potential Roles of Long Noncoding RNAs (lncRNA) in Glioblastoma Development., Mol. Cancer Ther.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC100793.1-1:3
4.0 RAMP2-AS1:2
4.1 RAMP2-AS1:2
5.0 RAMP2-AS1:2
5.1 RAMP2-AS1:2
5.2 RAMP2-AS1:2