Transcript: RAMP2-AS1:4

Basic information

LNCipedia transcript ID: RAMP2-AS1:4 
LNCipedia gene ID: RAMP2-AS1
Location (hg19): chr17:40905951-40913275
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1678 bp
Exons: 6
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT053764; ENST00000360166.3
Alternative gene names: ENSG00000197291.4; RAMP2-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -18.7771 non-coding 
CPAT coding probability 3.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RAMP2-AS1:4 no no no no

Available literature

  1. Liu (2016), The Potential Roles of Long Noncoding RNAs (lncRNA) in Glioblastoma Development., Mol. Cancer Ther.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC100793.1-1:1
4.0 RAMP2-AS1:4
4.1 RAMP2-AS1:4
5.0 RAMP2-AS1:4
5.1 RAMP2-AS1:4
5.2 RAMP2-AS1:4