Transcript: RAP2C-AS1:5

Basic information

LNCipedia transcript ID: RAP2C-AS1:5 
HGNC Gene Symbol: RAP2C-AS1    
HGNC Full Gene Name: RAP2C antisense RNA 1
Ensembl Gene ID: ENSG00000232160
Ensembl Transcript ID: ENST00000441399
Location (hg19): chrX:131352535-131566890
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3473 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000441399.2
Alternative gene names: ENSG00000232160.2; RAP2C-AS1; ENSG00000232160.6;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -41.0976 non-coding 
CPAT coding probability 0.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RAP2C-AS1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MST4.1-1:5
4.0 RAP2C-AS1:5
4.1 RAP2C-AS1:5
5.0 RAP2C-AS1:5
5.1 RAP2C-AS1:5
5.2 RAP2C-AS1:5