Transcript: RAP2C-AS1:7

Basic information

LNCipedia transcript ID: RAP2C-AS1:7 
LNCipedia gene ID: RAP2C-AS1
Location (hg19): chrX:131373648-131397007
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 257 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT138567
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -89.5878 non-coding 
CPAT coding probability 3.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RAP2C-AS1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MST4.1-1:7
4.0 RAP2C-AS1:7
4.1 RAP2C-AS1:7
5.0 RAP2C-AS1:7
5.1 RAP2C-AS1:7
5.2 RAP2C-AS1:7