Transcript: RASGRF2-AS1:2

Basic information

LNCipedia transcript ID: RASGRF2-AS1:2 
LNCipedia gene ID: RASGRF2-AS1
RefSeq ID: NR_105015
Location (hg19): chr5:80243512-80256726
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 539 bp
Exons: 4
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_105015; NR_105015.1
Alternative gene names: ; CTC-459I6.1; RASGRF2-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -120.0891 non-coding 
CPAT coding probability 0.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RASGRF2-AS1:2 no no no no

Available literature

  1. Singh (2016), Investigation of novel LPS-induced differentially expressed long non-coding RNAs in endothelial cells., Mol. Cell. Biochem.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DHFR-2:7
4.0 RASGRF2-AS1:2
4.1 RASGRF2-AS1:2
5.0 RASGRF2-AS1:2
5.1 RASGRF2-AS1:2
5.2 RASGRF2-AS1:2