Transcript: RFX3-AS1:20

Basic information

LNCipedia transcript ID: RFX3-AS1:20 
LNCipedia gene ID: RFX3-AS1
Location (hg19): chr9:3637335-3638338
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 728 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT130028
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -354.1419 non-coding 
CPAT coding probability 0.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RFX3-AS1:20 no no no no

Available literature

  1. Di Salvo (2015), Right ventricular long noncoding RNA expression in human heart failure., Pulm Circ


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLC1A1-13:1
4.0 lnc-SLC1A1-13:1
4.1 RFX3-AS1:20
5.0 RFX3-AS1:20
5.1 RFX3-AS1:20
5.2 RFX3-AS1:20