Transcript: RMST:1
Basic information
LNCipedia transcript ID: RMST:1
HGNC Gene Symbol: RMST
HGNC Full Gene Name:
rhabdomyosarcoma 2 associated transcript
Ensembl Gene ID:
ENSG00000255794
Ensembl Transcript ID:
ENST00000538559
Location (hg19): chr12:97825431-97958793
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2598 bp
Exons: 14
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000538559; ENST00000538559.2; RMST-003; OTTHUMT00000407671.1; NONHSAT030089; ENST00000538559.6
Alternative gene names: ENSG00000255794; RMST; ENSG00000255794.2; OTTHUMG00000170148.1; ENSG00000255794.6; NCRMS; NCRNA00054; LINC00054; ENSG00000255794.7
RNA sequence:
Structure:
Protein coding potential
In stringent set: no
Locus conservation
Locus conservation? | ||||
---|---|---|---|---|
RMST:1 | no | no | no | no |
Available literature
- Briese (2016), Whole transcriptome profiling reveals the RNA content of motor axons., Nucleic Acids Res.
- Wang (2015), Identification of lncRNA-associated competing triplets reveals global patterns and prognostic markers for cancer., Nucleic Acids Res.
- Chaudhry (2014), Small nucleolar RNA host genes and long non-coding RNA responses in directly irradiated and bystander cells., Cancer Biother. Radiopharm.
- Hudson (2014), The structure, function and evolution of proteins that bind DNA and RNA., Nat. Rev. Mol. Cell Biol.
- Su (2014), Comprehensive analysis of long non-coding RNAs in human breast cancer clinical subtypes., Oncotarget
- Guan (2013), Switching cell fate, ncRNAs coming to play., Cell Death Dis
- Ng (2013), The long noncoding RNA RMST interacts with SOX2 to regulate neurogenesis., Mol. Cell
- Ng (2012), Human long non-coding RNAs promote pluripotency and neuronal differentiation by association with chromatin modifiers and transcription factors., EMBO J.
- Uhde (2010), Rmst is a novel marker for the mouse ventral mesencephalic floor plate and the anterior dorsal midline cells., PLoS ONE
- Chan (2002), Identification of a novel gene NCRMS on chromosome 12q21 with differential expression between rhabdomyosarcoma subtypes., Oncogene
LNCipedia transcript ID history
LNCipedia version | LNCipedia transcript ID |
---|---|
1.3 | lnc-NEDD1-3:1 |
3.1 | lnc-NEDD1-4:1 |
4.0 | RMST:1 |
4.1 | RMST:1 |
5.0 | RMST:1 |
5.1 | RMST:1 |
5.2 | RMST:1 |