Transcript: RNF139-AS1:13

Basic information

LNCipedia transcript ID: RNF139-AS1:13 
LNCipedia gene ID: RNF139-AS1
Location (hg19): chr8:125465197-125486805
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 15139 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000245149.3|MICT00000350781.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 21.1433 non-coding 
CPAT coding probability 6.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RNF139-AS1:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 RNF139-AS1:13
5.0 RNF139-AS1:13
5.1 RNF139-AS1:13
5.2 RNF139-AS1:13