Transcript: RNF217-AS1:15

Basic information

LNCipedia transcript ID: RNF217-AS1:15 
LNCipedia gene ID: RNF217-AS1
Location (hg19): chr6:125230239-125284182
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4504 bp
Exons: 7
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000236548.1|ENST00000439075.1
Alternative gene names: STL


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 7.3256 non-coding 
CPAT coding probability 0.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RNF217-AS1:15 no no no no

Available literature

  1. Suto (1997), A t(6;12)(q23;p13) results in the fusion of ETV6 to a novel gene, STL, in a B-cell ALL cell line., Genes Chromosomes Cancer


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 RNF217-AS1:15
5.0 RNF217-AS1:15
5.1 RNF217-AS1:15
5.2 RNF217-AS1:15