Transcript: ROR1-AS1:4

Basic information

LNCipedia transcript ID: ROR1-AS1:4 
HGNC Gene Symbol: ROR1-AS1    
HGNC Full Gene Name: ROR1 antisense RNA 1
Ensembl Gene ID: ENSG00000223949
Ensembl Transcript ID: ENST00000412349
RefSeq ID: NR_110666
Location (hg19): chr1:64560125-64577888
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1574 bp
Exons: 6
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT003701; ENST00000412349.2; NR_110666; ENST00000412349.6; NR_110666.1
Alternative gene names: ENSG00000223949.2; RP11-24J23.2; ENSG00000223949.6; ROR1-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 10.2464 non-coding 
CPAT coding probability 7.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ROR1-AS1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ITGB3BP-4:3
4.0 ROR1-AS1:4
4.1 ROR1-AS1:4
5.0 ROR1-AS1:4
5.1 ROR1-AS1:4
5.2 ROR1-AS1:4