Transcript: RORA-AS2:2

Basic information

LNCipedia transcript ID: RORA-AS2:2 
LNCipedia gene ID: RORA-AS2
RefSeq ID: NR_120319
Location (hg19): chr15:60973768-60979448
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 950 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_120319; NR_120319.1
Alternative gene names: ; RORA-AS2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -207.0081 non-coding 
CPAT coding probability 5.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RORA-AS2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FOXB1-4:4
4.0 RORA-AS2:2
4.1 RORA-AS2:2
5.0 RORA-AS2:2
5.1 RORA-AS2:2
5.2 RORA-AS2:2