Transcript: RUNDC3A-AS1:3

Basic information

LNCipedia transcript ID: RUNDC3A-AS1:3 
HGNC Gene Symbol: RUNDC3A-AS1    
HGNC Full Gene Name: RUNDC3A antisense RNA 1
Ensembl Gene ID: ENSG00000267750
Ensembl Transcript ID: ENST00000588097
Location (hg19): chr17:42376942-42392683
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 5203 bp
Exons: 5
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT053930; ENST00000588097.1; ENST00000588097.5
Alternative gene names: ENSG00000267750.1; AC003102.3; ENSG00000267750.5; RUNDC3A-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 206.2433 coding 
CPAT coding probability 11.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
RUNDC3A-AS1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLC25A39-1:2
4.0 RUNDC3A-AS1:3
4.1 RUNDC3A-AS1:3
5.0 RUNDC3A-AS1:3
5.1 RUNDC3A-AS1:3
5.2 RUNDC3A-AS1:3