Transcript: SAP30L-AS1:12

Basic information

LNCipedia transcript ID: SAP30L-AS1:12 
LNCipedia gene ID: SAP30L-AS1
Location (hg19): chr5:153771731-153825382
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1048 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000245275.3|ENST00000524264.1
Alternative gene names: FLJ38109; GALNT10-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 32.5909 non-coding 
CPAT coding probability 0.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SAP30L-AS1:12 yes no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 SAP30L-AS1:12
5.0 SAP30L-AS1:12
5.1 SAP30L-AS1:12
5.2 SAP30L-AS1:12