Transcript: SCEL-AS1:7

Basic information

LNCipedia transcript ID: SCEL-AS1:7 
LNCipedia gene ID: SCEL-AS1
RefSeq ID: NR_126412
Location (hg19): chr13:78173890-78180686
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 570 bp
Exons: 4
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_126412.1
Alternative gene names: SCEL-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -284.5932 non-coding 
CPAT coding probability 0.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SCEL-AS1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 SCEL-AS1:7
5.1 SCEL-AS1:7
5.2 SCEL-AS1:7