Transcript: SEMA3B-AS1:6

Basic information

LNCipedia transcript ID: SEMA3B-AS1:6 
LNCipedia gene ID: SEMA3B-AS1
Location (hg19): chr3:50303851-50304965
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 722 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000232352.1|FTMT20900020554.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -103.7354 non-coding 
CPAT coding probability 4.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SEMA3B-AS1:6 no no no no

Available literature

  1. Wang (2016), Transcriptome Analysis of Long Noncoding RNAs in Toll-Like Receptor 3-Activated Mesenchymal Stem Cells., Stem Cells Int


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 SEMA3B-AS1:6
5.0 SEMA3B-AS1:6
5.1 SEMA3B-AS1:6
5.2 SEMA3B-AS1:6