Transcript: SEPSECS-AS1:2

Basic information

LNCipedia transcript ID: SEPSECS-AS1:2 
LNCipedia gene ID: SEPSECS-AS1
Location (hg19): chr4:25162294-25202498
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 3491 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT095826
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1.8492 non-coding 
CPAT coding probability 54.06% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
SEPSECS-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PI4K2B-1:2
4.0 SEPSECS-AS1:2
4.1 SEPSECS-AS1:2
5.0 SEPSECS-AS1:2
5.1 SEPSECS-AS1:2
5.2 SEPSECS-AS1:2