Transcript: SH3RF3-AS1:3

Basic information

LNCipedia transcript ID: SH3RF3-AS1:3 
LNCipedia gene ID: SH3RF3-AS1
RefSeq ID: NR_029193
Location (hg19): chr2:109743783-109746575
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2793 bp
Exons: 1
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_029193.1
Alternative gene names: SH3RF3-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 49.8428 non-coding 
CPAT coding probability 99.90% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
SH3RF3-AS1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 SH3RF3-AS1:3
5.1 SH3RF3-AS1:3
5.2 SH3RF3-AS1:3