Transcript: SHANK2-AS3:1
Basic information
LNCipedia transcript ID: SHANK2-AS3:1
HGNC Gene Symbol: SHANK2-AS3
HGNC Full Gene Name:
SHANK2 antisense RNA 3
Ensembl Gene ID:
ENSG00000171671
Ensembl Transcript ID:
ENST00000307548
RefSeq ID:
NR_073536
Location (hg19): chr11:70708895-70711220
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1683 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000307548.2; SHANK2-AS3-001; OTTHUMT00000316872.1; NONHSAT022671; NR_073536; NR_073536.1
Alternative gene names: ENSG00000171671.6; SHANK2-AS3; OTTHUMG00000150217.1;
RNA sequence:
Structure:
Protein coding potential
In stringent set: no
Locus conservation
Available literature
- Wang (2015), Genome-wide differential expression of synaptic long noncoding RNAs in autism spectrum disorder., Transl Psychiatry
- Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.
LNCipedia transcript ID history
LNCipedia version | LNCipedia transcript ID |
---|---|
3.1 | lnc-CTTN-4:1 |
4.0 | SHANK2-AS3:1 |
4.1 | SHANK2-AS3:1 |
5.0 | SHANK2-AS3:1 |
5.1 | SHANK2-AS3:1 |
5.2 | SHANK2-AS3:1 |