Transcript: SLC25A25-AS1:23

Basic information

LNCipedia transcript ID: SLC25A25-AS1:23 
LNCipedia gene ID: SLC25A25-AS1
Location (hg19): chr9:130875641-130881084
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2550 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000234771.2|ENST00000536815.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -24.1789 non-coding 
CPAT coding probability 32.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SLC25A25-AS1:23 no no no no

Available literature

  1. Li (2016), Decreased expression of LncRNA SLC25A25-AS1 promotes proliferation, chemoresistance, and EMT in colorectal cancer cells., Tumour Biol.
  2. Xu (2014), [Expression of long non-coding RNA associated with radiotherapy-resistance in colorectal cancer cell lines with different radiosensitivity]., Zhonghua Wei Chang Wai Ke Za Zhi


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 SLC25A25-AS1:23
5.0 SLC25A25-AS1:23
5.1 SLC25A25-AS1:23
5.2 SLC25A25-AS1:23