Transcript: SLC7A11-AS1:3

Basic information

LNCipedia transcript ID: SLC7A11-AS1:3 
LNCipedia gene ID: SLC7A11-AS1
Location (hg19): chr4:139011988-139026947
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1434 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT098417
Alternative gene names: ; ENST00000512786


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.182 non-coding 
CPAT coding probability 1.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SLC7A11-AS1:3 no no no no

Available literature

  1. Long (2016), Distinct expression profiles of lncRNAs between early-onset preeclampsia and preterm controls., Clin. Chim. Acta


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CCRN4L-4:6
4.0 SLC7A11-AS1:3
4.1 SLC7A11-AS1:3
5.0 SLC7A11-AS1:3
5.1 SLC7A11-AS1:3
5.2 SLC7A11-AS1:3