Transcript: SLCO4A1-AS1:4

Basic information

LNCipedia transcript ID: SLCO4A1-AS1:4 
LNCipedia gene ID: SLCO4A1-AS1
RefSeq ID: NR_024470
Location (hg19): chr20:61294379-61297973
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1423 bp
Exons: 4
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT080773; NR_024470; NR_024470.1
Alternative gene names: ; SLCO4A1-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 266.02 coding 
CPAT coding probability 64.94% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
SLCO4A1-AS1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-93B14.6.1-2:4
4.0 SLCO4A1-AS1:4
4.1 SLCO4A1-AS1:4
5.0 SLCO4A1-AS1:4
5.1 SLCO4A1-AS1:4
5.2 SLCO4A1-AS1:4