Transcript: SLCO4A1-AS1:9

Basic information

LNCipedia transcript ID: SLCO4A1-AS1:9 
LNCipedia gene ID: SLCO4A1-AS1
Location (hg19): chr20:61294383-61298000
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1446 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000232803.1|ENST00000433126.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 266.02 coding 
CPAT coding probability 49.99% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
SLCO4A1-AS1:9 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 SLCO4A1-AS1:9
5.0 SLCO4A1-AS1:9
5.1 SLCO4A1-AS1:9
5.2 SLCO4A1-AS1:9