Transcript: SMIM10L2B-AS1:9

Basic information

LNCipedia transcript ID: SMIM10L2B-AS1:9 
LNCipedia gene ID: SMIM10L2B-AS1
Location (hg19): chrX:134257168-134257528
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 361 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT138683
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -428.0669 non-coding 
CPAT coding probability 15.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SMIM10L2B-AS1:9 no no no no

Available literature

  1. Long (2016), Distinct expression profiles of lncRNAs between early-onset preeclampsia and preterm controls., Clin. Chim. Acta


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM127A-2:4
4.0 lnc-FAM127A-2:4
4.1 lnc-FAM127A-2:4
5.0 lnc-FAM127A-2:4
5.1 SMIM10L2B-AS1:5
5.2 SMIM10L2B-AS1:9