Transcript: SMIM15-AS1:25

Basic information

LNCipedia transcript ID: SMIM15-AS1:25 
LNCipedia gene ID: SMIM15-AS1
Location (hg19): chr5:60458325-60476338
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 280 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000251279.1|FTMT21900015417.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -114.1708 non-coding 
CPAT coding probability 1.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SMIM15-AS1:25 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NDUFAF2-2:10
5.0 lnc-NDUFAF2-2:10
5.1 SMIM15-AS1:9
5.2 SMIM15-AS1:25